Index

_

__init__() (src.cli.ClassImportAction method) (src.cli.CLIArgument method) (src.cli.CLIArgumentGroup method) (src.cli.CLICommand method) (src.cli.CLIConfigManager method) (src.cli.CLIParser method) (src.cli.CustomHelpFormatter method) (src.cli.MDTFArgParser method) (src.cli.MDTFArgPreparser method) (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.cli.PathAction method) (src.cli.PluginArgAction method) (src.cli.RecordDefaultsAction method) (src.cmip6.CMIP6_CVs method) (src.cmip6.CMIP6_DRSDirectory method) (src.cmip6.CMIP6_DRSFilename method) (src.cmip6.CMIP6_DRSPath method) (src.cmip6.CMIP6_GridLabel method) (src.cmip6.CMIP6_MIPTable method) (src.cmip6.CMIP6_VariantLabel method) (src.cmip6.CMIP6DateFrequency method) (src.core.ConfigManager method) (src.core.ConfigTuple method) (src.core.Fieldlist method) (src.core.FieldlistEntry method) (src.core.MDTFFramework method) (src.core.MDTFObjectBase method) (src.core.NoTranslationFieldlist method) (src.core.PathManager method) (src.core.TempDirManager method) (src.core.TranslatedVarlistEntry method) (src.core.VariableTranslator method) (src.data_manager.AbstractFetchMixin method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataFrameDataKey method) (src.data_manager.DataFrameQueryColumnGroup method) (src.data_manager.DataframeQueryColumnSpec method) (src.data_manager.DataKeyBase method) (src.data_manager.DataSourceAttributesBase method) (src.data_manager.FileGlobTuple method) (src.data_manager.LocalFetchMixin method) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin method) (src.data_manager.OnTheFlyFilesystemQueryMixin method) (src.data_manager.OnTheFlyGlobQueryMixin method) (src.data_manager.PodVarTuple method) (src.data_model.AbstractDMCoordinate method) (src.data_model.AbstractDMCoordinateBounds method) (src.data_model.AbstractDMDependentVariable method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMBoundsDimension method) (src.data_model.DMCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDataSet method) (src.data_model.DMDependentVariable method) (src.data_model.DMGenericTimeCoordinate method) (src.data_model.DMLatitudeCoordinate method) (src.data_model.DMLongitudeCoordinate method) (src.data_model.DMParametricVerticalCoordinate method) (src.data_model.DMPlaceholderCoordinate method) (src.data_model.DMPlaceholderTCoordinate method) (src.data_model.DMPlaceholderXCoordinate method) (src.data_model.DMPlaceholderYCoordinate method) (src.data_model.DMPlaceholderZCoordinate method) (src.data_model.DMTimeCoordinate method) (src.data_model.DMVariable method) (src.data_model.DMVerticalCoordinate method) (src.data_sources.CMIP6DataSourceAttributes method) (src.data_sources.CMIP6ExperimentSelectionMixin method) (src.data_sources.ExplicitFileDataAttributes method) (src.data_sources.ExplicitFileDataSourceConfigEntry method) (src.data_sources.GlobbedDataFile method) (src.data_sources.MetadataRewriteParser method) (src.data_sources.MetadataRewritePreprocessor method) (src.data_sources.SampleDataAttributes method) (src.data_sources.SampleDataFile method) (src.diagnostic.Diagnostic method) (src.diagnostic.Varlist method) (src.diagnostic.VarlistCoordinate method) (src.diagnostic.VarlistCoordinateMixin method) (src.diagnostic.VarlistEntry method) (src.diagnostic.VarlistLatitudeCoordinate method) (src.diagnostic.VarlistLongitudeCoordinate method) (src.diagnostic.VarlistPlaceholderTimeCoordinate method) (src.diagnostic.VarlistSettings method) (src.diagnostic.VarlistTimeCoordinate method) (src.diagnostic.VarlistVerticalCoordinate method) (src.environment_manager.AbstractRuntimeManager method) (src.environment_manager.SubprocessRuntimePODWrapper method) (src.install.InstallCLIHandler method) (src.install.MDTFInstaller method) (src.mdtf_info.InfoCLIHandler method) (src.mdtf_info.PodDataTuple method) (src.output_manager.HTMLPodOutputManager method) (src.output_manager.HTMLSourceFileMixin method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.tests.shared_test_utils.DummyMDTFFramework method) (src.util.basic.ConsistentDict method) (src.util.basic.MDTF_ID method) (src.util.basic.MDTFABCMeta method) (src.util.basic.MultiMap method) (src.util.basic.NameSpace method) (src.util.basic.Singleton method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.ChainedRegexPattern method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternBase method) (src.util.dataclass.RegexPatternWithTemplate method) (src.util.datelabel.AbstractDate method) (src.util.datelabel.AbstractDateFrequency method) (src.util.datelabel.AbstractDateRange method) (src.util.datelabel.AtomicInterval method) (src.util.datelabel.DateFrequency method) (src.util.datelabel.DateMixin method) (src.util.exceptions.ChildFailureEvent method) (src.util.exceptions.ConventionError method) (src.util.exceptions.DataclassParseError method) (src.util.exceptions.DataExperimentEvent method) (src.util.exceptions.DataFetchEvent method) (src.util.exceptions.DataPreprocessEvent method) (src.util.exceptions.DataProcessingEvent method) (src.util.exceptions.DataQueryEvent method) (src.util.exceptions.DataRequestError method) (src.util.exceptions.FatalErrorEvent method) (src.util.exceptions.FXDateException method) (src.util.exceptions.GenericDataSourceEvent method) (src.util.exceptions.MDTFBaseException method) (src.util.exceptions.MDTFEvent method) (src.util.exceptions.MDTFFileExistsError method) (src.util.exceptions.MDTFFileNotFoundError method) (src.util.exceptions.MetadataError method) (src.util.exceptions.MetadataEvent method) (src.util.exceptions.MixedDatePrecisionException method) (src.util.exceptions.PodConfigError method) (src.util.exceptions.PodConfigEvent method) (src.util.exceptions.PodDataError method) (src.util.exceptions.PodExceptionBase method) (src.util.exceptions.PodExecutionError method) (src.util.exceptions.PodRuntimeError method) (src.util.exceptions.PropagatedEvent method) (src.util.exceptions.RegexParseError method) (src.util.exceptions.RegexSuppressedError method) (src.util.exceptions.TimeoutAlarm method) (src.util.exceptions.UnitsError method) (src.util.exceptions.UnitsUndefinedError method) (src.util.exceptions.WormKeyError method) (src.util.logs.CaseLoggerMixin method) (src.util.logs.EqLevelFilter method) (src.util.logs.GeqLevelFilter method) (src.util.logs.HangingIndentFormatter method) (src.util.logs.LtLevelFilter method) (src.util.logs.MDTFObjectLogger method) (src.util.logs.MDTFObjectLoggerMixin method) (src.util.logs.MDTFObjectLoggerMixinBase method) (src.util.logs.NameMatchFilter method) (src.util.logs.PODLoggerMixin method) (src.util.logs.StringIOHandler method) (src.util.logs.TagMatchFilter method) (src.util.logs.VarlistEntryLoggerMixin method) (src.verify_links.Link method) (src.verify_links.LinkVerifier method) (src.xr_parser.DefaultDatasetParser method) (src.xr_parser.MDTFCFAccessorMixin method) (src.xr_parser.MDTFCFDataArrayAccessor method) (src.xr_parser.MDTFCFDatasetAccessor method) (src.xr_parser.MDTFCFDatasetAccessorMixin method) (src.xr_parser.MDTFDataArrayAccessorMixin method) (src.xr_parser.PlaceholderScalarCoordinate method)

__post_init__() (src.cli.CLIArgument method) (src.cli.CLICommand method) (src.cli.CLIParser method) (src.cmip6.CMIP6_DRSDirectory method) (src.cmip6.CMIP6_DRSFilename method) (src.cmip6.CMIP6_DRSPath method) (src.cmip6.CMIP6_GridLabel method) (src.cmip6.CMIP6_MIPTable method) (src.cmip6.CMIP6_VariantLabel method) (src.core.Fieldlist method) (src.core.FieldlistEntry method) (src.core.MDTFFramework method) (src.core.MDTFObjectBase method) (src.core.TranslatedVarlistEntry method) (src.data_manager.DataFrameDataKey method) (src.data_manager.DataframeQueryColumnSpec method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataKeyBase method) (src.data_manager.DataSourceAttributesBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMBoundsDimension method) (src.data_model.DMCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDataSet method) (src.data_model.DMDependentVariable method) (src.data_model.DMGenericTimeCoordinate method) (src.data_model.DMLatitudeCoordinate method) (src.data_model.DMLongitudeCoordinate method) (src.data_model.DMParametricVerticalCoordinate method) (src.data_model.DMPlaceholderCoordinate method) (src.data_model.DMPlaceholderTCoordinate method) (src.data_model.DMPlaceholderXCoordinate method) (src.data_model.DMPlaceholderYCoordinate method) (src.data_model.DMPlaceholderZCoordinate method) (src.data_model.DMTimeCoordinate method) (src.data_model.DMVariable method) (src.data_model.DMVerticalCoordinate method) (src.data_sources.CMIP6DataSourceAttributes method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataAttributes method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.ExplicitFileDataSourceConfigEntry method) (src.data_sources.GlobbedDataFile method) (src.data_sources.SampleDataAttributes method) (src.data_sources.SampleDataFile method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.Varlist method) (src.diagnostic.VarlistCoordinate method) (src.diagnostic.VarlistCoordinateMixin method) (src.diagnostic.VarlistEntry method) (src.diagnostic.VarlistLatitudeCoordinate method) (src.diagnostic.VarlistLongitudeCoordinate method) (src.diagnostic.VarlistPlaceholderTimeCoordinate method) (src.diagnostic.VarlistSettings method) (src.diagnostic.VarlistTimeCoordinate method) (src.diagnostic.VarlistVerticalCoordinate method) (src.environment_manager.SubprocessRuntimePODWrapper method) (src.xr_parser.PlaceholderScalarCoordinate method)

A

abbreviate_path() (in module src.util.filesystem) abstract_attribute() (in module src.util.basic) AbstractDataSource (class in src.data_manager) AbstractDate (class in src.util.datelabel) AbstractDateFrequency (class in src.util.datelabel) AbstractDateRange (class in src.util.datelabel) AbstractDMCoordinate (class in src.data_model) AbstractDMCoordinateBounds (class in src.data_model) AbstractDMDependentVariable (class in src.data_model) AbstractEnvironmentManager (class in src.environment_manager) AbstractFetchMixin (class in src.data_manager) AbstractOutputManager (class in src.output_manager) AbstractQueryMixin (class in src.data_manager) AbstractRuntimeManager (class in src.environment_manager) action (src.cli.CLIArgument attribute) activate_env_commands() (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.VirtualenvEnvironmentManager method) ACTIVE (src.core.ObjectStatus attribute) active() (src.core.MDTFFramework property) (src.core.MDTFObjectBase property) (src.data_manager.DataFrameDataKey property) (src.data_manager.DataframeQueryDataSourceBase property) (src.data_manager.DataKeyBase property) (src.data_manager.DataSourceBase property) (src.data_manager.LocalFileDataSource property) (src.data_manager.SingleLocalFileDataSource property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.SampleLocalFileDataSource property) (src.diagnostic.Diagnostic property) (src.diagnostic.VarlistEntry property) activity_id (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) add() (src.cli.CLIArgument method) (src.cli.CLIArgumentGroup method) add_contents() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.data_model.DMDataSet method) (src.diagnostic.Varlist method) add_convention() (src.core.VariableTranslator method) add_input_file_arg() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) add_plugin_args() (src.cli.CLIParser method) add_scalar() (src.core.FieldlistEntry method) (src.core.TranslatedVarlistEntry method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDependentVariable method) (src.data_model.DMVariable method) (src.diagnostic.VarlistEntry method) add_site_arg() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) adjoins() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) adjoins_left() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) adjoins_right() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) all_axes() (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) all_columns() (src.data_manager.DataframeQueryDataSourceBase property) (src.data_manager.LocalFileDataSource property) (src.data_manager.SingleLocalFileDataSource property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.SampleLocalFileDataSource property) all_expt_cols() (src.data_manager.DataframeQueryColumnSpec property) all_freqs (src.tests.test_cmip6.TestCMIP6DateFrequency attribute) all_same_if_possible() (in module src.conflict_resolution) ALTERNATE (src.diagnostic.VarlistEntryRequirement attribute) alternates (src.diagnostic.VarlistEntry attribute) alternates_str() (src.diagnostic.VarlistEntry static method) ANY_NETCDF (src.diagnostic.PodDataFileFormat attribute) ANY_NETCDF3 (src.diagnostic.PodDataFileFormat attribute) ANY_NETCDF4 (src.diagnostic.PodDataFileFormat attribute) ANY_NETCDF_CLASSIC (src.diagnostic.PodDataFileFormat attribute) append_html_template() (in module src.util.filesystem) append_result_link() (src.output_manager.HTMLOutputManager method) ApplyScaleAndOffsetFunction (class in src.preprocessor) arg_flags (src.cli.CLIArgument attribute) args (src.util.exceptions.ChildFailureEvent attribute) (src.util.exceptions.ConventionError attribute) (src.util.exceptions.DataclassParseError attribute) (src.util.exceptions.DataExperimentEvent attribute) (src.util.exceptions.DataFetchEvent attribute) (src.util.exceptions.DataPreprocessEvent attribute) (src.util.exceptions.DataProcessingEvent attribute) (src.util.exceptions.DataQueryEvent attribute) (src.util.exceptions.DataRequestError attribute) (src.util.exceptions.FatalErrorEvent attribute) (src.util.exceptions.FXDateException attribute) (src.util.exceptions.GenericDataSourceEvent attribute) (src.util.exceptions.MDTFBaseException attribute) (src.util.exceptions.MDTFCalledProcessError attribute) (src.util.exceptions.MDTFEvent attribute) (src.util.exceptions.MDTFFileExistsError attribute) (src.util.exceptions.MDTFFileNotFoundError attribute) (src.util.exceptions.MetadataError attribute) (src.util.exceptions.MetadataEvent attribute) (src.util.exceptions.MixedDatePrecisionException attribute) (src.util.exceptions.PodConfigError attribute) (src.util.exceptions.PodConfigEvent attribute) (src.util.exceptions.PodDataError attribute) (src.util.exceptions.PodExceptionBase attribute) (src.util.exceptions.PodExecutionError attribute) (src.util.exceptions.PodRuntimeError attribute) (src.util.exceptions.PropagatedEvent attribute) (src.util.exceptions.RegexParseError attribute) (src.util.exceptions.RegexSuppressedError attribute) (src.util.exceptions.TimeoutAlarm attribute) (src.util.exceptions.UnitsError attribute) (src.util.exceptions.UnitsUndefinedError attribute) (src.util.exceptions.WormKeyError attribute)

argument_groups (src.cli.CLIParser attribute) arguments (src.cli.CLIArgumentGroup attribute) (src.cli.CLIParser attribute) AtomicInterval (class in src.util.datelabel) ATTR_NOT_FOUND (in module src.xr_parser) attrs() (src.data_manager.FileGlobTuple property) AUX_COORDINATE (src.diagnostic.VarlistEntryRequirement attribute) aux_coords (src.data_model.DMDataSet attribute) (src.diagnostic.Varlist attribute) axes (src.core.Fieldlist attribute) axes() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.VarlistEntry property) (src.xr_parser.MDTFCFDataArrayAccessor method) (src.xr_parser.MDTFCFDatasetAccessor method) (src.xr_parser.MDTFCFDatasetAccessorMixin method) (src.xr_parser.MDTFDataArrayAccessorMixin method) axes_lut (src.core.Fieldlist attribute) axes_set() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.VarlistEntry property) (src.xr_parser.MDTFCFAccessorMixin property) (src.xr_parser.MDTFCFDataArrayAccessor property) (src.xr_parser.MDTFCFDatasetAccessor property) (src.xr_parser.MDTFCFDatasetAccessorMixin property) (src.xr_parser.MDTFDataArrayAccessorMixin property) axis (src.data_model.DMBoundsDimension attribute) (src.data_model.DMCoordinate attribute) (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMLatitudeCoordinate attribute) (src.data_model.DMLongitudeCoordinate attribute) (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMPlaceholderXCoordinate attribute) (src.data_model.DMPlaceholderYCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_model.DMVerticalCoordinate attribute) (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) (src.xr_parser.PlaceholderScalarCoordinate attribute) axis() (src.data_model.AbstractDMCoordinate property)

B

backup_config() (src.core.ConfigManager method) backup_config_files() (src.output_manager.HTMLOutputManager method) backup_filename() (src.core.ConfigTuple property) BANNER (src.util.logs.ObjectLogTag attribute) bounds (src.data_model.DMBoundsDimension attribute) bounds() (src.data_model.AbstractDMCoordinate property) (src.data_model.DMCoordinate property) (src.data_model.DMGenericTimeCoordinate property) (src.data_model.DMLatitudeCoordinate property) (src.data_model.DMLongitudeCoordinate property) (src.data_model.DMParametricVerticalCoordinate property) (src.data_model.DMPlaceholderCoordinate property) (src.data_model.DMPlaceholderTCoordinate property) (src.data_model.DMPlaceholderXCoordinate property) (src.data_model.DMPlaceholderYCoordinate property) (src.data_model.DMPlaceholderZCoordinate property) (src.data_model.DMTimeCoordinate property) (src.data_model.DMVerticalCoordinate property) (src.diagnostic.VarlistCoordinate property) (src.diagnostic.VarlistLatitudeCoordinate property) (src.diagnostic.VarlistLongitudeCoordinate property) (src.diagnostic.VarlistPlaceholderTimeCoordinate property) (src.diagnostic.VarlistTimeCoordinate property) (src.diagnostic.VarlistVerticalCoordinate property) bounds_var (src.data_model.DMCoordinate attribute) (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMLatitudeCoordinate attribute) (src.data_model.DMLongitudeCoordinate attribute) (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMPlaceholderXCoordinate attribute) (src.data_model.DMPlaceholderYCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_model.DMVerticalCoordinate attribute) (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute)

breadth_first() (src.verify_links.LinkVerifier method) buffer_contents() (src.util.logs.StringIOHandler method) build_axes() (src.core.FieldlistEntry method) (src.core.TranslatedVarlistEntry method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDataSet method) (src.data_model.DMDependentVariable method) (src.data_model.DMVariable method) (src.diagnostic.Varlist method) (src.diagnostic.VarlistEntry method) bump_version() (in module src.util.filesystem)

C

calendar (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) calendar() (src.xr_parser.MDTFCFAccessorMixin property) (src.xr_parser.MDTFCFDataArrayAccessor property) (src.xr_parser.MDTFCFDatasetAccessor property) (src.xr_parser.MDTFCFDatasetAccessorMixin property) (src.xr_parser.MDTFDataArrayAccessorMixin property) call() (src.cli.CLICommand method) call_on_defaults (src.cli.ClassImportAction attribute) (src.cli.PathAction attribute) (src.cli.PluginArgAction attribute) (src.cli.RecordDefaultsAction attribute) canonical_arg_name() (in module src.cli) case_dict (src.tests.test_core.TestPathManagerPodCase attribute) case_list (src.tests.shared_test_utils.DummyMDTFFramework attribute) CASE_ROOT_DIR (src.data_manager.DataSourceAttributesBase attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) (src.data_sources.ExplicitFileDataAttributes attribute) (src.data_sources.SampleDataAttributes attribute) CASE_TEMP_HTML() (src.output_manager.HTMLOutputManager property) (src.output_manager.HTMLPodOutputManager property) (src.output_manager.HTMLSourceFileMixin property) CaseLoggerMixin (class in src.util.logs) CASENAME (src.data_manager.DataSourceAttributesBase attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) (src.data_sources.ExplicitFileDataAttributes attribute) (src.data_sources.SampleDataAttributes attribute) cases (src.tests.shared_test_utils.DummyMDTFFramework attribute) cast_to_cftime() (src.preprocessor.CropDateRangeFunction static method) CATALOG_DIR (src.data_manager.LocalFileDataSource attribute) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin attribute) (src.data_manager.OnTheFlyFilesystemQueryMixin attribute) (src.data_manager.OnTheFlyGlobQueryMixin attribute) (src.data_manager.SingleLocalFileDataSource attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) CATALOG_DIR() (src.data_sources.CMIP6ExperimentSelectionMixin property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.SampleLocalFileDataSource property) CDATA_CONTENT_ELEMENTS (src.verify_links.LinkParser attribute) chain_exc() (in module src.util.exceptions) ChainedRegexPattern (class in src.util.dataclass) change_coord() (src.core.FieldlistEntry method) (src.core.TranslatedVarlistEntry method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDataSet method) (src.data_model.DMDependentVariable method) (src.data_model.DMVariable method) (src.diagnostic.Varlist method) (src.diagnostic.VarlistEntry method) characters_written (src.util.exceptions.MDTFFileExistsError attribute) (src.util.exceptions.MDTFFileNotFoundError attribute) check_calendar() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) check_dir() (in module src.util.filesystem) check_ds_attrs() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) check_executable() (in module src.util.filesystem) check_group_daterange() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) check_metadata() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) check_one_url() (src.verify_links.LinkVerifier method) checksum_files_in_subtree() (in module src.tests.shared_test_utils) checksum_function() (in module src.tests.shared_test_utils) child_deactivation_handler() (src.core.MDTFFramework method) (src.core.MDTFObjectBase method) (src.data_manager.DataFrameDataKey method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataKeyBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) child_status_update() (src.core.MDTFFramework method) (src.core.MDTFObjectBase method) (src.data_manager.DataFrameDataKey method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataKeyBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) ChildFailureEvent choices (src.cli.CLIArgument attribute) ClassImportAction (class in src.cli) clean_nc_var_encoding() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) clean_output_attrs() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method)

cleanup() (src.core.TempDirManager method) cleanup_pod_files() (src.output_manager.HTMLPodOutputManager method) clear() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.ChainedRegexPattern method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) cli (src.cli.CLICommand attribute) cli_file (src.cli.CLICommand attribute) CLIArgument (class in src.cli) CLIArgumentGroup (class in src.cli) CLICommand (class in src.cli) CLIConfigManager (class in src.cli) CLIParser (class in src.cli) close() (src.util.logs.StringIOHandler method) close_log_file() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.util.logs.CaseLoggerMixin method) CLOSED (src.util.datelabel.AtomicInterval attribute) (src.util.datelabel.Date attribute) (src.util.datelabel.DateRange attribute) CMIP6_CVs (class in src.cmip6) CMIP6_DRSDirectory (class in src.cmip6) CMIP6_DRSFilename (class in src.cmip6) CMIP6_DRSPath (class in src.cmip6) CMIP6_GridLabel (class in src.cmip6) CMIP6_MIPTable (class in src.cmip6) CMIP6_VariantLabel (class in src.cmip6) CMIP6DataSourceAttributes (class in src.data_sources) CMIP6DateFrequency (class in src.cmip6) CMIP6ExperimentSelectionMixin (class in src.data_sources) CMIP6LocalFileDataSource (class in src.data_sources) code_root (src.cli.CLICommand attribute) (src.tests.shared_test_utils.DummyMDTFFramework attribute) coerce_to_dataclass() (in module src.util.dataclass) col_spec (src.data_manager.DataframeQueryDataSourceBase attribute) (src.data_manager.LocalFileDataSource attribute) (src.data_manager.SingleLocalFileDataSource attribute) (src.data_sources.CMIP6LocalFileDataSource attribute) (src.data_sources.ExplicitFileDataSource attribute) (src.data_sources.SampleLocalFileDataSource attribute) compare_attr() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) computed_standard_name (src.data_model.DMParametricVerticalCoordinate attribute) conda_env_create() (in module src.install) CondaEnvironmentManager (class in src.environment_manager) config_file (src.data_sources.ExplicitFileDataAttributes attribute) ConfigManager (class in src.core) ConfigTuple (class in src.core) configure() (src.cli.CLIParser method) (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.core.MDTFFramework method) (src.install.MDTFInstaller method) configure_pods() (in module src.tests.shared_test_utils) ConsistentDict (class in src.util.basic) const (src.cli.CLIArgument attribute) contains() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) contents (src.data_model.DMDataSet attribute) (src.diagnostic.Varlist attribute) contents() (src.core.ConfigTuple property) contiguous_span() (src.util.datelabel.AtomicInterval class method) (src.util.datelabel.Date class method) (src.util.datelabel.DateRange class method) convention (src.core.TranslatedVarlistEntry attribute) (src.data_manager.DataSourceAttributesBase attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) (src.data_sources.ExplicitFileDataAttributes attribute) (src.data_sources.SampleDataAttributes attribute) (src.diagnostic.Diagnostic attribute) ConventionError conversion_factor() (in module src.units) convert_dataarray() (in module src.units) convert_pod_figures() (src.output_manager.HTMLPodOutputManager method) convert_scalar_coord() (in module src.units) converter() (src.util.logs.HangingIndentFormatter method) ConvertUnitsFunction (class in src.preprocessor) coord() (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.DMCoordinateBounds property) coord_bounds (src.data_model.DMDataSet attribute) (src.diagnostic.Varlist attribute) coordinate_from_struct() (in module src.data_model) coords (src.core.FieldlistEntry attribute) (src.core.TranslatedVarlistEntry attribute) (src.data_model.DMAuxiliaryCoordinate attribute) (src.data_model.DMCoordinateBounds attribute) (src.data_model.DMDataSet attribute) (src.data_model.DMDependentVariable attribute) (src.data_model.DMVariable attribute) (src.diagnostic.Varlist attribute) (src.diagnostic.VarlistEntry attribute) copy() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) copy_as_alternate() (in module src.preprocessor) copy_to_output() (src.output_manager.HTMLOutputManager method) create_all_environments() (src.environment_manager.CondaEnvironmentManager method) create_environment() (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.VirtualenvEnvironmentManager method) critical() (src.util.logs.MDTFObjectLogger method) CropDateRangeFunction (class in src.preprocessor) CustomHelpFormatter (class in src.cli)

D

daemon() (src.util.processes.ExceptionPropagatingThread property) DaskMultiFilePreprocessor (class in src.preprocessor) data (src.diagnostic.VarlistEntry attribute) data() (src.util.dataclass.ChainedRegexPattern property) data_key() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) dataclass_factory() (in module src.util.dataclass) DataclassParseError DataExperimentEvent DataFetchEvent DataFrameDataKey (class in src.data_manager) DataFrameQueryColumnGroup (class in src.data_manager) DataframeQueryColumnSpec (class in src.data_manager) DataframeQueryDataSourceBase (class in src.data_manager) DataKeyBase (class in src.data_manager) DataPreprocessEvent DataProcessingEvent DataQueryEvent DataRequestError DataSourceAttributesBase (class in src.data_manager) DataSourceBase (class in src.data_manager) Date (class in src.util.datelabel) date_format() (src.util.datelabel.Date static method) (src.util.datelabel.DateMixin static method) (src.util.datelabel.DateRange static method) date_range (src.cmip6.CMIP6_DRSFilename attribute) (src.data_manager.DataSourceAttributesBase attribute) DateFrequency (class in src.util.datelabel) DateMixin (class in src.util.datelabel) DatePrecision (class in src.util.datelabel) DateRange (class in src.util.datelabel) daterange_col (src.data_manager.DataframeQueryColumnSpec attribute) DAY (src.util.datelabel.DatePrecision attribute) deactivate() (src.core.MDTFFramework method) (src.core.MDTFObjectBase method) (src.data_manager.DataFrameDataKey method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataKeyBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) deactivate_data_key() (src.diagnostic.VarlistEntry method) deactivate_env_commands() (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.VirtualenvEnvironmentManager method) debug() (src.util.logs.MDTFObjectLogger method) debug_str() (src.diagnostic.VarlistEntry method) decrement() (src.util.datelabel.Date class method) (src.util.datelabel.DateMixin class method) (src.util.datelabel.DateRange class method) default (src.cli.CLIArgument attribute) default_case (src.tests.test_data_manager.TestDataManagerFetchData attribute) (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) default_factory (src.util.basic.MultiMap attribute) default_msec_format (src.util.logs.HangingIndentFormatter attribute) default_pod (src.tests.test_diagnostic.TestDiagnosticCheckVarlist attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings attribute) (src.tests.test_diagnostic.TestDiagnosticTearDown attribute) default_pod_CF (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_diagnostic.TestDiagnosticInit attribute) default_pod_not_CF (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) default_site (src.cli.CLIConfigManager attribute) default_time_format (src.util.logs.HangingIndentFormatter attribute) default_value_suffix (src.cli.ClassImportAction attribute) (src.cli.PathAction attribute) (src.cli.PluginArgAction attribute) (src.cli.RecordDefaultsAction attribute) DefaultDatasetParser (class in src.xr_parser) DefaultPreprocessor (class in src.preprocessor) defaults_filename (src.cli.CLIConfigManager attribute) DefaultsFileTypes (class in src.cli) description (src.cli.CLIArgumentGroup attribute) (src.cli.CLIParser attribute) (src.diagnostic.Diagnostic attribute)

deserialize_class() (in module src.util.basic) dest (src.cli.CLIArgument attribute) dest_path (src.diagnostic.VarlistEntry attribute) destroy_environment() (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.VirtualenvEnvironmentManager method) df() (src.data_manager.DataframeQueryDataSourceBase property) (src.data_manager.LocalFileDataSource property) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin property) (src.data_manager.OnTheFlyFilesystemQueryMixin property) (src.data_manager.OnTheFlyGlobQueryMixin property) (src.data_manager.SingleLocalFileDataSource property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.SampleLocalFileDataSource property) Diagnostic (class in src.diagnostic) dim_axes() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property) (src.xr_parser.MDTFCFDataArrayAccessor method) (src.xr_parser.MDTFCFDatasetAccessor method) (src.xr_parser.MDTFCFDatasetAccessorMixin method) (src.xr_parser.MDTFDataArrayAccessorMixin method) dim_axes_set() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property) (src.xr_parser.MDTFCFAccessorMixin property) (src.xr_parser.MDTFCFDataArrayAccessor property) (src.xr_parser.MDTFCFDatasetAccessor property) (src.xr_parser.MDTFCFDatasetAccessorMixin property) (src.xr_parser.MDTFDataArrayAccessorMixin property) dimensions_ordered (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistSettings attribute) dims() (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) directory (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSPath attribute) dispatch() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) dispatch_classes() (src.core.MDTFFramework method) DMAuxiliaryCoordinate (class in src.data_model) DMBoundsDimension (class in src.data_model) DMCoordinate (class in src.data_model) DMCoordinateBounds (class in src.data_model) DMDataSet (class in src.data_model) DMDependentVariable (class in src.data_model) DMGenericTimeCoordinate (class in src.data_model) DMLatitudeCoordinate (class in src.data_model) DMLongitudeCoordinate (class in src.data_model) DMParametricVerticalCoordinate (class in src.data_model) DMPlaceholderCoordinate (class in src.data_model) DMPlaceholderTCoordinate (class in src.data_model) DMPlaceholderXCoordinate (class in src.data_model) DMPlaceholderYCoordinate (class in src.data_model) DMPlaceholderZCoordinate (class in src.data_model) DMTimeCoordinate (class in src.data_model) DMVariable (class in src.data_model) DMVerticalCoordinate (class in src.data_model) driver (src.diagnostic.Diagnostic attribute) dummy_group (src.data_sources.GlobbedDataFile attribute) dummy_paths (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist attribute) (src.tests.test_diagnostic.TestDiagnosticInit attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings attribute) (src.tests.test_diagnostic.TestDiagnosticTearDown attribute) dummy_var_translate (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist attribute) (src.tests.test_diagnostic.TestDiagnosticInit attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings attribute) (src.tests.test_diagnostic.TestDiagnosticTearDown attribute) DummyMDTFFramework (class in src.tests.shared_test_utils)

E

edit_request() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.ApplyScaleAndOffsetFunction method) (src.preprocessor.ConvertUnitsFunction method) (src.preprocessor.CropDateRangeFunction method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.ExtractLevelFunction method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.PrecipRateToFluxFunction method) (src.preprocessor.PreprocessorFunctionBase method) (src.preprocessor.RenameVariablesFunction method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) edit_request_wrapper() (in module src.preprocessor) end() (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) end_date (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) end_datetime() (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) entries (src.core.Fieldlist attribute) entry_point (src.cli.CLICommand attribute) env (src.environment_manager.SubprocessRuntimePODWrapper attribute) env_name_prefix (src.environment_manager.CondaEnvironmentManager attribute) env_var (src.diagnostic.VarlistEntry attribute) env_vars (src.core.Fieldlist attribute) (src.environment_manager.SubprocessRuntimePODWrapper attribute)

env_vars() (src.diagnostic.VarlistEntry property) epilog (src.cli.CLIParser attribute) EqLevelFilter (class in src.util.logs) errno (src.util.exceptions.MDTFFileExistsError attribute) (src.util.exceptions.MDTFFileNotFoundError attribute) error() (src.util.logs.MDTFObjectLogger method) exc_descriptor() (in module src.util.exceptions) exception() (src.util.logs.MDTFObjectLogger method) ExceptionPropagatingThread (class in src.util.processes) exit_handler() (in module src.util.exceptions) exit_on_exception() (in module src.util.exceptions) experiment (src.data_sources.CMIP6DataSourceAttributes attribute) experiment_id (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) ExplicitFileDataAttributes (class in src.data_sources) ExplicitFileDataSource (class in src.data_sources) ExplicitFileDataSourceConfigEntry (class in src.data_sources) expt_cols (src.data_manager.DataframeQueryColumnSpec attribute) (src.data_sources.ExplicitFileDataSource attribute) expt_key (src.data_manager.DataFrameDataKey attribute) (src.data_manager.DataKeyBase attribute) expt_key() (src.data_manager.DataFrameQueryColumnGroup method) (src.data_manager.DataframeQueryColumnSpec method) expt_key_cols (src.data_sources.ExplicitFileDataSource attribute) expt_key_func() (src.data_manager.DataFrameQueryColumnGroup method) ExtractLevelFunction (class in src.preprocessor)

F

FAILED (src.core.ObjectStatus attribute) failed() (src.core.MDTFFramework property) (src.core.MDTFObjectBase property) (src.data_manager.DataFrameDataKey property) (src.data_manager.DataframeQueryDataSourceBase property) (src.data_manager.DataKeyBase property) (src.data_manager.DataSourceBase property) (src.data_manager.LocalFileDataSource property) (src.data_manager.SingleLocalFileDataSource property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.SampleLocalFileDataSource property) (src.diagnostic.Diagnostic property) (src.diagnostic.VarlistEntry property) failureException (src.tests.test_cli.TestCanonicalArgName attribute) (src.tests.test_cli.TestCLIConfigManager attribute) (src.tests.test_cli.TestMDTFArgParserBasic attribute) (src.tests.test_cli.TestMDTFArgParserHelpFormat attribute) (src.tests.test_cli.TestMDTFArgParserRecordDefaults attribute) (src.tests.test_cli.TestParseDummyInput attribute) (src.tests.test_cli.TestWordWrap attribute) (src.tests.test_cmip6.TestCMIP6_CVs attribute) (src.tests.test_cmip6.TestCMIP6DateFrequency attribute) (src.tests.test_cmip6.TestDRSFilename attribute) (src.tests.test_cmip6.TestDRSPath attribute) (src.tests.test_cmip6.TestMIPTableParsing attribute) (src.tests.test_core.TestPathManager attribute) (src.tests.test_core.TestPathManagerPodCase attribute) (src.tests.test_core.TestVariableTranslator attribute) (src.tests.test_core.TestVariableTranslatorFiles attribute) (src.tests.test_data_manager.TestDataManagerFetchData attribute) (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist attribute) (src.tests.test_diagnostic.TestDiagnosticInit attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings attribute) (src.tests.test_diagnostic.TestDiagnosticTearDown attribute) (src.tests.test_environment_manager.TestEnvironmentManager attribute) (src.tests.test_mdtf.TestMDTFArgParsing attribute) (src.tests.test_units.TestRefTime attribute) (src.tests.test_units.TestUnitConversionFactor attribute) (src.util.tests.test_basic.TestMDTFABCMeta attribute) (src.util.tests.test_basic.TestMDTFEnum attribute) (src.util.tests.test_basic.TestMultiMap attribute) (src.util.tests.test_basic.TestNameSpace attribute) (src.util.tests.test_basic.TestSerializeClass attribute) (src.util.tests.test_basic.TestSingleton attribute) (src.util.tests.test_basic.TestSpliceIntoList attribute) (src.util.tests.test_basic.TestWormDict attribute) (src.util.tests.test_dataclass.TestMDTFDataclass attribute) (src.util.tests.test_dataclass.TestRegexDataclassInheritance attribute) (src.util.tests.test_dataclass.TestRegexPattern attribute) (src.util.tests.test_datelabel.TestDate attribute) (src.util.tests.test_datelabel.TestDateFrequency attribute) (src.util.tests.test_datelabel.TestDateRange attribute) (src.util.tests.test_datelabel.TestFXDates attribute) (src.util.tests.test_filesystem.TestBumpVersion attribute) (src.util.tests.test_filesystem.TestCheckDirs attribute) (src.util.tests.test_filesystem.TestDoubleBraceTemplate attribute) (src.util.tests.test_filesystem.TestJSONC attribute) (src.util.tests.test_processes.TestSubprocessInteraction attribute) fatal_exception_handler() (in module src.install) FatalErrorEvent fetch_data() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) fetch_dataset() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractFetchMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFetchMixin method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) FETCHED (src.diagnostic.VarlistEntryStage attribute) Fieldlist (class in src.core) FieldlistEntry (class in src.core) FileGlobTuple (class in src.data_manager) filename (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.util.exceptions.MDTFFileExistsError attribute) (src.util.exceptions.MDTFFileNotFoundError attribute) filename2 (src.util.exceptions.MDTFFileExistsError attribute) (src.util.exceptions.MDTFFileNotFoundError attribute) filter() (src.util.logs.EqLevelFilter method) (src.util.logs.GeqLevelFilter method) (src.util.logs.LtLevelFilter method) (src.util.logs.NameMatchFilter method) (src.util.logs.TagMatchFilter method) filter_dataclass() (in module src.util.dataclass) filter_kwargs() (in module src.util.basic) find_conda() (in module src.install) find_files() (in module src.util.filesystem) find_json() (in module src.util.filesystem) find_var() (src.diagnostic.Varlist method) FIRSTYR (src.data_manager.DataSourceAttributesBase attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) (src.data_sources.ExplicitFileDataAttributes attribute) (src.data_sources.SampleDataAttributes attribute)

forcing_index (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_VariantLabel attribute) format (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistSettings attribute) format() (src.cmip6.CMIP6DateFrequency method) (src.util.dataclass.ChainedRegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) (src.util.datelabel.Date method) (src.util.datelabel.DateFrequency method) (src.util.datelabel.DateRange method) (src.util.logs.HangingIndentFormatter method) format_local() (src.cmip6.CMIP6DateFrequency method) (src.util.datelabel.DateFrequency method) format_log() (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) (src.util.logs.MDTFObjectLoggerMixin method) (src.util.logs.PODLoggerMixin method) (src.util.logs.VarlistEntryLoggerMixin method) formula_terms (src.data_model.DMParametricVerticalCoordinate attribute) formula_terms() (src.xr_parser.MDTFCFDataArrayAccessor property) (src.xr_parser.MDTFDataArrayAccessorMixin property) framework_dir() (src.cli.CLIConfigManager property) framework_test() (in module src.install) framework_verify() (in module src.install) frequency (src.cmip6.CMIP6_MIPTable attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_sources.SampleDataFile attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistSettings attribute) (src.diagnostic.VarlistTimeCoordinate attribute) from_CF() (src.core.Fieldlist method) (src.core.NoTranslationFieldlist method) (src.core.VariableTranslator method) from_CF_name() (src.core.Fieldlist method) (src.core.NoTranslationFieldlist method) (src.core.VariableTranslator method) from_config() (src.diagnostic.Diagnostic class method) from_contiguous_span() (src.util.datelabel.Date class method) (src.util.datelabel.DateRange class method) from_coordinate() (src.data_model.DMCoordinateBounds class method) from_date_span() (src.util.datelabel.Date class method) (src.util.datelabel.DateRange class method) from_dict() (src.cli.CLIArgumentGroup class method) (src.cli.CLIParser class method) from_instances() (src.data_model.DMGenericTimeCoordinate class method) (src.data_model.DMTimeCoordinate class method) (src.diagnostic.VarlistPlaceholderTimeCoordinate class method) (src.diagnostic.VarlistTimeCoordinate class method) from_iter() (in module src.util.basic) from_string() (src.cmip6.CMIP6_DRSDirectory class method) (src.cmip6.CMIP6_DRSFilename class method) (src.cmip6.CMIP6_DRSPath class method) (src.cmip6.CMIP6_GridLabel class method) (src.cmip6.CMIP6_MIPTable class method) (src.cmip6.CMIP6_VariantLabel class method) (src.data_sources.GlobbedDataFile class method) (src.data_sources.SampleDataFile class method) from_struct() (src.cmip6.CMIP6DateFrequency class method) (src.core.Fieldlist class method) (src.core.FieldlistEntry class method) (src.data_sources.ExplicitFileDataSourceConfigEntry class method) (src.diagnostic.Diagnostic class method) (src.diagnostic.Varlist class method) (src.diagnostic.VarlistEntry class method) (src.util.basic.ConsistentDict class method) (src.util.basic.WormDefaultDict class method) (src.util.basic.WormDict class method) (src.util.datelabel.DateFrequency class method) fromDict() (src.core.ConfigManager class method) (src.core.PathManager class method) (src.util.basic.NameSpace class method) fromkeys() (src.core.ConfigManager method) (src.core.PathManager method) (src.util.basic.ConsistentDict class method) (src.util.basic.MultiMap method) (src.util.basic.NameSpace method) (src.util.basic.WormDefaultDict class method) (src.util.basic.WormDict class method) (src.util.dataclass.RegexPattern class method) (src.util.dataclass.RegexPatternWithTemplate class method) ftp_download() (in module src.install) full_name() (src.core.FieldlistEntry property) (src.core.MDTFFramework property) (src.core.MDTFObjectBase property) (src.core.TranslatedVarlistEntry property) (src.data_manager.DataFrameDataKey property) (src.data_manager.DataframeQueryDataSourceBase property) (src.data_manager.DataKeyBase property) (src.data_manager.DataSourceBase property) (src.data_manager.LocalFileDataSource property) (src.data_manager.SingleLocalFileDataSource property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.ExplicitFileDataSourceConfigEntry property) (src.data_sources.SampleLocalFileDataSource property) (src.diagnostic.Diagnostic property) (src.diagnostic.VarlistEntry property) FXDateException FXDateFrequency (in module src.util.datelabel) FXDateRange (in module src.util.datelabel)

G

gen_links() (src.verify_links.LinkVerifier static method) generate_catalog() (src.data_manager.LocalFileDataSource method) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin method) (src.data_manager.OnTheFlyFilesystemQueryMixin method) (src.data_manager.OnTheFlyGlobQueryMixin method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) generate_checksum_test() (in module src.tests.shared_test_utils) GenericDataSourceEvent GeqLevelFilter (class in src.util.logs) get() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) get_() (src.util.basic.MultiMap method) get_config() (src.install.MDTFInstaller method) get_configuration() (in module src.tests.shared_test_utils) get_convention() (src.core.VariableTranslator method) get_convention_name() (src.core.VariableTranslator method) get_expt_key() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) get_logger() (src.util.logs.MDTFObjectLogger class method) get_lookup() (src.cmip6.CMIP6_CVs method) get_plugin() (src.cli.CLIConfigManager method) get_pod_env() (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.VirtualenvEnvironmentManager method) get_scalar() (src.core.FieldlistEntry method) (src.core.TranslatedVarlistEntry method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDataSet method) (src.data_model.DMDependentVariable method) (src.data_model.DMVariable method) (src.diagnostic.Varlist method) (src.diagnostic.VarlistEntry method) (src.xr_parser.MDTFCFDatasetAccessor method) (src.xr_parser.MDTFCFDatasetAccessorMixin method)

get_test_data_configuration() (in module src.tests.shared_test_utils) get_test_date_strings() (src.tests.test_units.TestRefTime method) get_test_reftimes() (src.tests.test_units.TestRefTime method) get_unmapped_names() (src.data_sources.MetadataRewriteParser static method) (src.xr_parser.DefaultDatasetParser static method) git_info() (in module src.util.logs) glob (src.data_sources.ExplicitFileDataSourceConfigEntry attribute) glob() (src.data_manager.FileGlobTuple property) glob_id (src.data_sources.ExplicitFileDataSourceConfigEntry attribute) GLOBAL (src.cli.DefaultsFileTypes attribute) global_env_vars (src.tests.shared_test_utils.DummyMDTFFramework attribute) global_mean (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_GridLabel attribute) global_settings() (src.diagnostic.VarlistSettings property) GlobbedDataFile (class in src.data_sources) grid_label (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_GridLabel attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) grid_number (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_GridLabel attribute) group_relative_links() (src.verify_links.LinkVerifier method) guess_attr() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method)

H

handle_starttag() (src.verify_links.LinkParser method) HangingIndentFormatter (class in src.util.logs) has_bounds() (src.data_model.AbstractDMCoordinate property) (src.data_model.DMBoundsDimension property) (src.data_model.DMCoordinate property) (src.data_model.DMGenericTimeCoordinate property) (src.data_model.DMLatitudeCoordinate property) (src.data_model.DMLongitudeCoordinate property) (src.data_model.DMParametricVerticalCoordinate property) (src.data_model.DMPlaceholderCoordinate property) (src.data_model.DMPlaceholderTCoordinate property) (src.data_model.DMPlaceholderXCoordinate property) (src.data_model.DMPlaceholderYCoordinate property) (src.data_model.DMPlaceholderZCoordinate property) (src.data_model.DMTimeCoordinate property) (src.data_model.DMVerticalCoordinate property) (src.diagnostic.VarlistCoordinate property) (src.diagnostic.VarlistLatitudeCoordinate property) (src.diagnostic.VarlistLongitudeCoordinate property) (src.diagnostic.VarlistPlaceholderTimeCoordinate property) (src.diagnostic.VarlistTimeCoordinate property) (src.diagnostic.VarlistVerticalCoordinate property)

has_date_info() (src.data_manager.DataframeQueryColumnSpec property) has_exceptions() (src.util.logs.MDTFObjectLogger property) HeaderFileHandler (class in src.util.logs) help (src.cli.CLIArgument attribute) (src.cli.CLICommand attribute) hidden (src.cli.CLIArgument attribute) HOUR (src.util.datelabel.DatePrecision attribute) html_src_file() (src.output_manager.HTMLOutputManager method) (src.output_manager.HTMLPodOutputManager method) (src.output_manager.HTMLSourceFileMixin method) html_templating_dict() (in module src.output_manager) HTMLOutputManager (class in src.output_manager) HTMLPodOutputManager (class in src.output_manager) HTMLSourceFileMixin (class in src.output_manager)

I

ident() (src.util.processes.ExceptionPropagatingThread property) import_target() (src.cli.CLICommand method) IN_FILE (src.util.logs.ObjectLogTag attribute) INACTIVE (src.core.ObjectStatus attribute) increment() (src.util.datelabel.Date class method) (src.util.datelabel.DateMixin class method) (src.util.datelabel.DateRange class method) info() (src.util.logs.MDTFObjectLogger method) info_cmds() (src.mdtf_info.InfoCLIHandler method) info_pod() (src.mdtf_info.InfoCLIHandler method) info_pods_all() (src.mdtf_info.InfoCLIHandler method) info_realm() (src.mdtf_info.InfoCLIHandler method) info_realms_all() (src.mdtf_info.InfoCLIHandler method) InfoCLIHandler (class in src.mdtf_info) init_extra_log_handlers() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) (src.util.logs.CaseLoggerMixin method) (src.util.logs.MDTFObjectLoggerMixin method) (src.util.logs.PODLoggerMixin method) (src.util.logs.VarlistEntryLoggerMixin method) init_log() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) (src.util.logs.CaseLoggerMixin method) (src.util.logs.MDTFObjectLoggerMixin method) (src.util.logs.PODLoggerMixin method) (src.util.logs.VarlistEntryLoggerMixin method) init_site() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) init_user_defaults() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) INITED (src.diagnostic.VarlistEntryStage attribute) initial_log_config() (in module src.util.logs) initialization_index (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_VariantLabel attribute) install() (src.install.MDTFInstaller method) InstallCLIHandler (class in src.install) institution_id (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) intersection() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) inverse() (src.util.basic.MultiMap method) inverse_get_() (src.util.basic.MultiMap method) is_empty() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) is_fetch_necessary() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) is_in_cv() (src.cmip6.CMIP6_CVs method) is_iterable() (in module src.util.basic) is_matched() (src.util.dataclass.ChainedRegexPattern property) is_positional (src.cli.CLIArgument attribute) is_regex_dataclass() (in module src.util.dataclass) is_scalar() (src.data_model.AbstractDMCoordinate property) (src.data_model.DMBoundsDimension property) (src.data_model.DMCoordinate property) (src.data_model.DMGenericTimeCoordinate property) (src.data_model.DMLatitudeCoordinate property) (src.data_model.DMLongitudeCoordinate property) (src.data_model.DMParametricVerticalCoordinate property) (src.data_model.DMPlaceholderCoordinate property) (src.data_model.DMPlaceholderTCoordinate property) (src.data_model.DMPlaceholderXCoordinate property) (src.data_model.DMPlaceholderYCoordinate property) (src.data_model.DMPlaceholderZCoordinate property) (src.data_model.DMTimeCoordinate property) (src.data_model.DMVerticalCoordinate property) (src.diagnostic.VarlistCoordinate property) (src.diagnostic.VarlistLatitudeCoordinate property) (src.diagnostic.VarlistLongitudeCoordinate property) (src.diagnostic.VarlistPlaceholderTimeCoordinate property) (src.diagnostic.VarlistTimeCoordinate property) (src.diagnostic.VarlistVerticalCoordinate property)

is_static() (src.cmip6.CMIP6DateFrequency property) (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMGenericTimeCoordinate property) (src.data_model.DMPlaceholderTCoordinate property) (src.data_model.DMTimeCoordinate property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property) (src.diagnostic.VarlistPlaceholderTimeCoordinate property) (src.diagnostic.VarlistTimeCoordinate property) (src.util.datelabel.Date property) (src.util.datelabel.DateFrequency property) (src.util.datelabel.DateRange property) (src.xr_parser.MDTFCFAccessorMixin property) (src.xr_parser.MDTFCFDataArrayAccessor property) (src.xr_parser.MDTFCFDatasetAccessor property) (src.xr_parser.MDTFCFDatasetAccessorMixin property) (src.xr_parser.MDTFDataArrayAccessorMixin property) isoformat() (src.util.datelabel.Date method) items() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) iter_actions() (src.cli.MDTFArgParser method) (src.cli.MDTFArgPreparser method) (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.install.InstallCLIHandler method) iter_active_pods() (src.environment_manager.SubprocessRuntimeManager method) iter_alternates() (src.diagnostic.VarlistEntry method) iter_arg_groups() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) iter_args() (src.cli.CLIParser method) iter_children() (src.core.MDTFFramework method) (src.core.MDTFObjectBase method) (src.data_manager.DataFrameDataKey method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataKeyBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.diagnostic.VarlistEntry method) iter_contents() (src.data_model.DMDataSet method) (src.diagnostic.Varlist method) iter_data_keys() (src.diagnostic.VarlistEntry method) iter_files() (src.data_manager.LocalFileDataSource method) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin method) (src.data_manager.OnTheFlyGlobQueryMixin method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) iter_globs() (src.data_manager.OnTheFlyGlobQueryMixin method) (src.data_sources.ExplicitFileDataSource method) iter_group_actions() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) iter_vars() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_model.DMDataSet method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Varlist method) iter_vars_only() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method)

J

join() (src.util.processes.ExceptionPropagatingThread method)

K

keys() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method)

L

last_exception() (src.diagnostic.Diagnostic property) (src.diagnostic.VarlistEntry property) (src.util.logs.MDTFObjectLoggerMixin property) (src.util.logs.PODLoggerMixin property) (src.util.logs.VarlistEntryLoggerMixin property) LASTYR (src.data_manager.DataSourceAttributesBase attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) (src.data_sources.ExplicitFileDataAttributes attribute) (src.data_sources.SampleDataAttributes attribute) left() (src.util.datelabel.AtomicInterval property) (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) Link (class in src.verify_links) LinkParser (class in src.verify_links) LinkVerifier (class in src.verify_links) load_ds() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) load_pod_settings() (in module src.mdtf_info) local_data (src.data_manager.DataFrameDataKey attribute) (src.data_manager.DataKeyBase attribute) local_data() (src.diagnostic.VarlistEntry property) LocalFetchMixin (class in src.data_manager) LocalFileDataSource (class in src.data_manager) log (src.core.TranslatedVarlistEntry attribute) (src.data_manager.DataSourceAttributesBase attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) (src.data_sources.ExplicitFileDataAttributes attribute) (src.data_sources.SampleDataAttributes attribute) log() (src.util.logs.MDTFObjectLogger method) log_file (src.diagnostic.Diagnostic attribute) log_history_attr() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) long_name (src.data_model.DMParametricVerticalCoordinate attribute) (src.diagnostic.Diagnostic attribute) longMessage (src.tests.test_cli.TestCanonicalArgName attribute) (src.tests.test_cli.TestCLIConfigManager attribute) (src.tests.test_cli.TestMDTFArgParserBasic attribute) (src.tests.test_cli.TestMDTFArgParserHelpFormat attribute) (src.tests.test_cli.TestMDTFArgParserRecordDefaults attribute) (src.tests.test_cli.TestParseDummyInput attribute) (src.tests.test_cli.TestWordWrap attribute) (src.tests.test_cmip6.TestCMIP6_CVs attribute) (src.tests.test_cmip6.TestCMIP6DateFrequency attribute) (src.tests.test_cmip6.TestDRSFilename attribute) (src.tests.test_cmip6.TestDRSPath attribute) (src.tests.test_cmip6.TestMIPTableParsing attribute) (src.tests.test_core.TestPathManager attribute) (src.tests.test_core.TestPathManagerPodCase attribute) (src.tests.test_core.TestVariableTranslator attribute) (src.tests.test_core.TestVariableTranslatorFiles attribute) (src.tests.test_data_manager.TestDataManagerFetchData attribute) (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist attribute) (src.tests.test_diagnostic.TestDiagnosticInit attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings attribute) (src.tests.test_diagnostic.TestDiagnosticTearDown attribute) (src.tests.test_environment_manager.TestEnvironmentManager attribute) (src.tests.test_mdtf.TestMDTFArgParsing attribute) (src.tests.test_units.TestRefTime attribute) (src.tests.test_units.TestUnitConversionFactor attribute) (src.util.tests.test_basic.TestMDTFABCMeta attribute) (src.util.tests.test_basic.TestMDTFEnum attribute) (src.util.tests.test_basic.TestMultiMap attribute) (src.util.tests.test_basic.TestNameSpace attribute) (src.util.tests.test_basic.TestSerializeClass attribute) (src.util.tests.test_basic.TestSingleton attribute) (src.util.tests.test_basic.TestSpliceIntoList attribute) (src.util.tests.test_basic.TestWormDict attribute) (src.util.tests.test_dataclass.TestMDTFDataclass attribute) (src.util.tests.test_dataclass.TestRegexDataclassInheritance attribute) (src.util.tests.test_dataclass.TestRegexPattern attribute) (src.util.tests.test_datelabel.TestDate attribute) (src.util.tests.test_datelabel.TestDateFrequency attribute) (src.util.tests.test_datelabel.TestDateRange attribute) (src.util.tests.test_datelabel.TestFXDates attribute) (src.util.tests.test_filesystem.TestBumpVersion attribute) (src.util.tests.test_filesystem.TestCheckDirs attribute) (src.util.tests.test_filesystem.TestDoubleBraceTemplate attribute) (src.util.tests.test_filesystem.TestJSONC attribute) (src.util.tests.test_processes.TestSubprocessInteraction attribute)

lookup() (src.cmip6.CMIP6_CVs method) lookup_single() (src.cmip6.CMIP6_CVs method) lower() (src.util.datelabel.AtomicInterval property) (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) LtLevelFilter (class in src.util.logs) lut (src.core.Fieldlist attribute)

M

main() (src.core.MDTFFramework method) make_html() (src.output_manager.HTMLOutputManager method) make_output() (src.output_manager.HTMLOutputManager method) (src.output_manager.HTMLPodOutputManager method) make_parser() (src.install.InstallCLIHandler method) make_pod_html() (src.output_manager.HTMLPodOutputManager method) make_scalar() (src.data_model.DMCoordinate method) (src.data_model.DMGenericTimeCoordinate method) (src.data_model.DMLatitudeCoordinate method) (src.data_model.DMLongitudeCoordinate method) (src.data_model.DMParametricVerticalCoordinate method) (src.data_model.DMPlaceholderCoordinate method) (src.data_model.DMPlaceholderTCoordinate method) (src.data_model.DMPlaceholderXCoordinate method) (src.data_model.DMPlaceholderYCoordinate method) (src.data_model.DMPlaceholderZCoordinate method) (src.data_model.DMTimeCoordinate method) (src.data_model.DMVerticalCoordinate method) (src.diagnostic.VarlistCoordinate method) (src.diagnostic.VarlistLatitudeCoordinate method) (src.diagnostic.VarlistLongitudeCoordinate method) (src.diagnostic.VarlistPlaceholderTimeCoordinate method) (src.diagnostic.VarlistTimeCoordinate method) (src.diagnostic.VarlistVerticalCoordinate method) make_tar_file() (src.output_manager.HTMLOutputManager method) make_tempdir() (src.core.TempDirManager method) makedirs() (src.install.MDTFInstaller method) manager (src.util.logs.MDTFObjectLogger attribute) MANDATORY (in module src.util.dataclass) match() (src.util.dataclass.ChainedRegexPattern method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) max (src.cmip6.CMIP6DateFrequency attribute) (src.util.datelabel.DateFrequency attribute) max_duration (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistSettings attribute) (src.diagnostic.VarlistTimeCoordinate attribute) max_frequency (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistSettings attribute) (src.diagnostic.VarlistTimeCoordinate attribute) maxDiff (src.tests.test_cli.TestCanonicalArgName attribute) (src.tests.test_cli.TestCLIConfigManager attribute) (src.tests.test_cli.TestMDTFArgParserBasic attribute) (src.tests.test_cli.TestMDTFArgParserHelpFormat attribute) (src.tests.test_cli.TestMDTFArgParserRecordDefaults attribute) (src.tests.test_cli.TestParseDummyInput attribute) (src.tests.test_cli.TestWordWrap attribute) (src.tests.test_cmip6.TestCMIP6_CVs attribute) (src.tests.test_cmip6.TestCMIP6DateFrequency attribute) (src.tests.test_cmip6.TestDRSFilename attribute) (src.tests.test_cmip6.TestDRSPath attribute) (src.tests.test_cmip6.TestMIPTableParsing attribute) (src.tests.test_core.TestPathManager attribute) (src.tests.test_core.TestPathManagerPodCase attribute) (src.tests.test_core.TestVariableTranslator attribute) (src.tests.test_core.TestVariableTranslatorFiles attribute) (src.tests.test_data_manager.TestDataManagerFetchData attribute) (src.tests.test_data_manager.TestDataManagerSetup attribute) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod attribute) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist attribute) (src.tests.test_diagnostic.TestDiagnosticInit attribute) (src.tests.test_diagnostic.TestDiagnosticSetUp attribute) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings attribute) (src.tests.test_diagnostic.TestDiagnosticTearDown attribute) (src.tests.test_environment_manager.TestEnvironmentManager attribute) (src.tests.test_mdtf.TestMDTFArgParsing attribute) (src.tests.test_units.TestRefTime attribute) (src.tests.test_units.TestUnitConversionFactor attribute) (src.util.tests.test_basic.TestMDTFABCMeta attribute) (src.util.tests.test_basic.TestMDTFEnum attribute) (src.util.tests.test_basic.TestMultiMap attribute) (src.util.tests.test_basic.TestNameSpace attribute) (src.util.tests.test_basic.TestSerializeClass attribute) (src.util.tests.test_basic.TestSingleton attribute) (src.util.tests.test_basic.TestSpliceIntoList attribute) (src.util.tests.test_basic.TestWormDict attribute) (src.util.tests.test_dataclass.TestMDTFDataclass attribute) (src.util.tests.test_dataclass.TestRegexDataclassInheritance attribute) (src.util.tests.test_dataclass.TestRegexPattern attribute) (src.util.tests.test_datelabel.TestDate attribute) (src.util.tests.test_datelabel.TestDateFrequency attribute) (src.util.tests.test_datelabel.TestDateRange attribute) (src.util.tests.test_datelabel.TestFXDates attribute) (src.util.tests.test_filesystem.TestBumpVersion attribute) (src.util.tests.test_filesystem.TestCheckDirs attribute) (src.util.tests.test_filesystem.TestDoubleBraceTemplate attribute) (src.util.tests.test_filesystem.TestJSONC attribute) (src.util.tests.test_processes.TestSubprocessInteraction attribute) mdtf_dataclass() (in module src.util.dataclass) MDTF_ID (class in src.util.basic) mdtf_log_header() (in module src.util.logs) MDTFABCMeta (class in src.util.basic) MDTFArgParser (class in src.cli) MDTFArgPreparser (class in src.cli) MDTFBaseException MDTFCalledProcessError

MDTFCFAccessorMixin (class in src.xr_parser) MDTFCFDataArrayAccessor (class in src.xr_parser) MDTFCFDatasetAccessor (class in src.xr_parser) MDTFCFDatasetAccessorMixin (class in src.xr_parser) MDTFConsoleHandler (class in src.util.logs) MDTFDataArrayAccessorMixin (class in src.xr_parser) MDTFEnum (class in src.util.basic) MDTFEvent MDTFFileExistsError MDTFFileNotFoundError MDTFFramework (class in src.core) MDTFHeaderFileHandler (class in src.util.logs) MDTFInstaller (class in src.install) MDTFIntEnum (class in src.util.basic) MDTFObjectBase (class in src.core) MDTFObjectLogger (class in src.util.logs) MDTFObjectLoggerMixin (class in src.util.logs) MDTFObjectLoggerMixinBase (class in src.util.logs) MDTFPreprocessorBase (class in src.preprocessor) MDTFTopLevelArgParser (class in src.cli) MDTFTopLevelSubcommandArgParser (class in src.cli) metadata (src.data_sources.ExplicitFileDataSourceConfigEntry attribute) MetadataError MetadataEvent MetadataRewriteParser (class in src.data_sources) MetadataRewritePreprocessor (class in src.data_sources) metavar (src.cli.CLIArgument attribute) min (src.cmip6.CMIP6DateFrequency attribute) (src.util.datelabel.DateFrequency attribute) min_duration (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistSettings attribute) (src.diagnostic.VarlistTimeCoordinate attribute) min_frequency (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistSettings attribute) (src.diagnostic.VarlistTimeCoordinate attribute) minimum_cover() (in module src.conflict_resolution) MINUTE (src.util.datelabel.DatePrecision attribute) MixedDatePrecisionException model (src.data_sources.CMIP6DataSourceAttributes attribute) model_paths() (src.core.PathManager method) modifier (src.core.FieldlistEntry attribute) (src.core.TranslatedVarlistEntry attribute) (src.data_model.DMAuxiliaryCoordinate attribute) (src.data_model.DMCoordinateBounds attribute) (src.data_model.DMDependentVariable attribute) (src.data_model.DMVariable attribute) (src.diagnostic.VarlistEntry attribute) module src src.cli src.cmip6 src.conflict_resolution src.core src.data_manager src.data_model src.data_sources src.diagnostic src.environment_manager src.install src.mdtf_info src.output_manager src.preprocessor src.tests src.tests.shared_test_utils src.tests.test_cli src.tests.test_cmip6 src.tests.test_core src.tests.test_data_manager src.tests.test_diagnostic src.tests.test_environment_manager src.tests.test_mdtf src.tests.test_units src.units src.util src.util.basic src.util.dataclass src.util.datelabel src.util.exceptions src.util.filesystem src.util.logs src.util.processes src.util.tests src.util.tests.test_basic src.util.tests.test_dataclass src.util.tests.test_datelabel src.util.tests.test_filesystem src.util.tests.test_processes src.verify_links src.xr_parser MONTH (src.util.datelabel.DatePrecision attribute) mro() (src.util.basic.MDTFABCMeta method) multi_compare() (src.tests.test_units.TestRefTime method) multi_compare_id() (src.tests.test_units.TestRefTime method) multi_file_ok (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistSettings attribute) MultiFlushMemoryHandler (class in src.util.logs) MultiMap (class in src.util.basic)

N

name (src.cli.CLIArgument attribute) (src.cli.CLICommand attribute) (src.core.Fieldlist attribute) (src.core.FieldlistEntry attribute) (src.core.MDTFFramework attribute) (src.core.MDTFObjectBase attribute) (src.core.TranslatedVarlistEntry attribute) (src.data_manager.DataFrameDataKey attribute) (src.data_manager.DataframeQueryDataSourceBase attribute) (src.data_manager.DataKeyBase attribute) (src.data_manager.DataSourceBase attribute) (src.data_manager.LocalFileDataSource attribute) (src.data_manager.SingleLocalFileDataSource attribute) (src.data_model.DMAuxiliaryCoordinate attribute) (src.data_model.DMBoundsDimension attribute) (src.data_model.DMCoordinate attribute) (src.data_model.DMCoordinateBounds attribute) (src.data_model.DMDependentVariable attribute) (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMLatitudeCoordinate attribute) (src.data_model.DMLongitudeCoordinate attribute) (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMPlaceholderXCoordinate attribute) (src.data_model.DMPlaceholderYCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_model.DMVariable attribute) (src.data_model.DMVerticalCoordinate attribute) (src.data_sources.CMIP6LocalFileDataSource attribute) (src.data_sources.ExplicitFileDataSource attribute) (src.data_sources.ExplicitFileDataSourceConfigEntry attribute) (src.data_sources.SampleLocalFileDataSource attribute) (src.diagnostic.Diagnostic attribute) (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) (src.xr_parser.PlaceholderScalarCoordinate attribute) name() (src.core.ConfigTuple property) (src.data_manager.FileGlobTuple property) (src.data_model.AbstractDMCoordinate property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.util.logs.HeaderFileHandler property) (src.util.logs.MDTFConsoleHandler property) (src.util.logs.MDTFHeaderFileHandler property) (src.util.logs.MultiFlushMemoryHandler property) (src.util.logs.StringIOHandler property) (src.util.processes.ExceptionPropagatingThread property)

name_in_model() (src.diagnostic.VarlistEntry property) NameMatchFilter (class in src.util.logs) NameSpace (class in src.util.basic) nargs (src.cli.CLIArgument attribute) native_grid (src.cmip6.CMIP6_GridLabel attribute) NC_HISTORY (src.util.logs.ObjectLogTag attribute) nc_largefile (src.diagnostic.Diagnostic attribute) need_bounds (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistCoordinateMixin attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) NETCDF3_CLASSIC (src.diagnostic.PodDataFileFormat attribute) NETCDF4 (src.diagnostic.PodDataFileFormat attribute) NETCDF4_CLASSIC (src.diagnostic.PodDataFileFormat attribute) NETCDF_64BIT_DATA (src.diagnostic.PodDataFileFormat attribute) NETCDF_64BIT_OFFSET (src.diagnostic.PodDataFileFormat attribute) normalize_attr() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) normalize_calendar() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) normalize_dependent_var() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) normalize_metadata() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) normalize_pre_decode() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) normalize_standard_name() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) normalize_unit() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) NoTranslationFieldlist (class in src.core) NOTSET (in module src.util.dataclass) (src.core.ObjectStatus attribute) (src.diagnostic.VarlistEntryStage attribute) NullEnvironmentManager (class in src.environment_manager)

O

ObjectLogTag (class in src.util.logs) ObjectStatus (class in src.core) OnTheFlyDirectoryHierarchyQueryMixin (class in src.data_manager) OnTheFlyFilesystemQueryMixin (class in src.data_manager) OnTheFlyGlobQueryMixin (class in src.data_manager) OPEN (src.util.datelabel.AtomicInterval attribute) (src.util.datelabel.Date attribute) (src.util.datelabel.DateRange attribute) open_dataset_kwargs() (src.data_sources.MetadataRewritePreprocessor property) (src.preprocessor.DaskMultiFilePreprocessor property) (src.preprocessor.DefaultPreprocessor property) (src.preprocessor.MDTFPreprocessorBase property) (src.preprocessor.SampleDataPreprocessor property) (src.preprocessor.SingleFilePreprocessor property)

OPTIONAL (src.diagnostic.VarlistEntryRequirement attribute) origin() (src.verify_links.Link property) OUT_FILE (src.util.logs.ObjectLogTag attribute) overlaps() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method)

P

parse() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) parse_args() (src.cli.MDTFArgParser method) (src.cli.MDTFArgPreparser method) (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.install.InstallCLIHandler method) parse_case() (src.core.MDTFFramework method) parse_case_list() (src.core.MDTFFramework method) parse_config() (src.data_sources.ExplicitFileDataSource method) (src.install.MDTFInstaller method) parse_env_vars() (src.core.MDTFFramework method) parse_flags() (src.core.MDTFFramework method) parse_input_file() (src.cli.MDTFArgPreparser method) parse_json() (in module src.util.filesystem) parse_known_args() (src.cli.MDTFArgParser method) (src.cli.MDTFArgPreparser method) (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.install.InstallCLIHandler method) parse_mdtf_args() (src.core.MDTFFramework method) parse_plugins() (src.cli.MDTFArgPreparser method) parse_pod_list() (src.core.MDTFFramework method) parse_site() (src.cli.MDTFArgPreparser method) parser (src.cli.CLICommand attribute) patch_cf_xarray_accessor() (in module src.xr_parser) path (src.cmip6.CMIP6_DRSPath attribute) path_variable (src.diagnostic.VarlistEntry attribute) PathAction (class in src.cli) PathManager (class in src.core) physics_index (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_VariantLabel attribute) PlaceholderScalarCoordinate (class in src.xr_parser) plugin_key() (in module src.cli) PluginArgAction (class in src.cli) plugins_filename (src.cli.CLIConfigManager attribute) pod (src.environment_manager.SubprocessRuntimePODWrapper attribute) pod() (src.data_manager.PodVarTuple property) POD_CODE_DIR (src.diagnostic.Diagnostic attribute) pod_data() (src.mdtf_info.PodDataTuple property) pod_env_vars (src.diagnostic.Diagnostic attribute) pod_expt_cols (src.data_manager.DataframeQueryColumnSpec attribute) POD_HTML() (src.output_manager.HTMLOutputManager method) (src.output_manager.HTMLPodOutputManager method) (src.output_manager.HTMLSourceFileMixin method) pod_html_template_file_name() (src.output_manager.HTMLOutputManager static method) (src.output_manager.HTMLPodOutputManager static method) (src.output_manager.HTMLSourceFileMixin static method) pod_list (src.tests.shared_test_utils.DummyMDTFFramework attribute) pod_name (src.data_sources.ExplicitFileDataSourceConfigEntry attribute) POD_OBS_DATA (src.diagnostic.Diagnostic attribute) POD_OUT_DIR (src.diagnostic.Diagnostic attribute) pod_paths() (src.core.PathManager method) POD_WK_DIR (src.diagnostic.Diagnostic attribute) PodConfigError PodConfigEvent PodDataError PodDataFileFormat (class in src.diagnostic) PodDataTuple (class in src.mdtf_info) PodExceptionBase PodExecutionError PODLoggerMixin (class in src.util.logs) PodRuntimeError PodVarTuple (class in src.data_manager) poll_command() (in module src.util.processes) pop() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) popitem() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) positive (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMVerticalCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) post_fetch_hook() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractFetchMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFetchMixin method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method)

post_query_and_fetch_hook() (src.data_manager.AbstractDataSource method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) post_query_hook() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) pre_fetch_hook() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractFetchMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFetchMixin method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) pre_query_and_fetch_hook() (src.data_manager.AbstractDataSource method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) pre_query_hook() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) pre_run_setup() (src.diagnostic.Diagnostic method) (src.environment_manager.SubprocessRuntimePODWrapper method) PrecipRateToFluxFunction (class in src.preprocessor) preprocess_data() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) PREPROCESSED (src.diagnostic.VarlistEntryStage attribute) preprocessor (src.diagnostic.Diagnostic attribute) PreprocessorFunctionBase (class in src.preprocessor) pretty_print_json() (in module src.util.filesystem) print_config() (src.install.MDTFInstaller method) print_summary() (in module src.core) process (src.environment_manager.SubprocessRuntimePODWrapper attribute) process() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.ApplyScaleAndOffsetFunction method) (src.preprocessor.ConvertUnitsFunction method) (src.preprocessor.CropDateRangeFunction method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.ExtractLevelFunction method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.PrecipRateToFluxFunction method) (src.preprocessor.PreprocessorFunctionBase method) (src.preprocessor.RenameVariablesFunction method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) process_ds() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) prog (src.cli.CLIParser attribute) program (src.diagnostic.Diagnostic attribute) PropagatedEvent

Q

QUERIED (src.diagnostic.VarlistEntryStage attribute) query_and_fetch_cleanup() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) query_attrs() (src.diagnostic.VarlistEntry method) query_data() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method)

query_dataset() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method)

R

range (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) read_config_file() (in module src.cli) read_config_files() (in module src.cli) read_conventions() (src.core.VariableTranslator method) read_dataset() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) read_defaults() (src.cli.CLIConfigManager method) read_json() (in module src.util.filesystem) read_one_file() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) read_plugins() (src.cli.CLIConfigManager method) read_subcommands() (src.cli.CLIConfigManager method) realization_index (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_VariantLabel attribute) realm (src.diagnostic.Diagnostic attribute) realm_data() (src.mdtf_info.PodDataTuple property) reconcile_attr() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_coord_bounds() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_dimension_coords() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_name() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_names() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_scalar_coords() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_scalar_value_and_units() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_time_units() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_units() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) reconcile_variable() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) RecordDefaultsAction (class in src.cli) recursive_copy() (in module src.util.filesystem) regex_dataclass() (in module src.util.dataclass) RegexParseError RegexPattern (class in src.util.dataclass) RegexPatternBase (class in src.util.dataclass) RegexPatternWithTemplate (class in src.util.dataclass) RegexSuppressedError region (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_GridLabel attribute) (src.cmip6.CMIP6_MIPTable attribute) register() (src.util.basic.MDTFABCMeta method) regrid (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_GridLabel attribute) relative_tol() (in module src.units) remote_data() (src.data_manager.DataFrameDataKey method) (src.data_manager.DataKeyBase method) remote_data_col (src.data_manager.DataframeQueryColumnSpec attribute) remote_data_col() (src.data_manager.DataframeQueryDataSourceBase property) (src.data_manager.LocalFileDataSource property) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin property) (src.data_manager.OnTheFlyFilesystemQueryMixin property) (src.data_manager.OnTheFlyGlobQueryMixin property) (src.data_manager.SingleLocalFileDataSource property) (src.data_sources.CMIP6LocalFileDataSource property) (src.data_sources.ExplicitFileDataSource property) (src.data_sources.SampleLocalFileDataSource property)

remote_path (src.data_sources.GlobbedDataFile attribute) (src.data_sources.SampleDataFile attribute) remove_prefix() (in module src.util.basic) remove_scalar() (src.core.FieldlistEntry method) (src.core.TranslatedVarlistEntry method) (src.data_model.DMAuxiliaryCoordinate method) (src.data_model.DMCoordinateBounds method) (src.data_model.DMDependentVariable method) (src.data_model.DMVariable method) (src.diagnostic.VarlistEntry method) remove_suffix() (in module src.util.basic) rename_variables (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistSettings attribute) RenameVariablesFunction (class in src.preprocessor) replace() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) request_data() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) require_all_same() (in module src.conflict_resolution) required (src.cli.CLIArgument attribute) REQUIRED (src.diagnostic.VarlistEntryRequirement attribute) requirement (src.diagnostic.VarlistEntry attribute) reset() (src.verify_links.LinkParser method) reset_buffer() (src.util.logs.StringIOHandler method) resolution (src.cmip6.CMIP6DateFrequency attribute) (src.util.datelabel.DateFrequency attribute) resolve_expt() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6ExperimentSelectionMixin method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) resolve_path() (in module src.util.filesystem) resolve_pod_expt() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6ExperimentSelectionMixin method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) resolve_var_expt() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6ExperimentSelectionMixin method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) restore_attrs_backup() (src.data_sources.MetadataRewriteParser method) (src.xr_parser.DefaultDatasetParser method) right() (src.util.datelabel.AtomicInterval property) (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) rm_tempdir() (src.core.TempDirManager method) root (src.util.logs.MDTFObjectLogger attribute) run() (src.environment_manager.AbstractRuntimeManager method) (src.environment_manager.SubprocessRuntimeManager method) (src.util.processes.ExceptionPropagatingThread method) run_command() (in module src.util.processes) run_commands() (src.environment_manager.SubprocessRuntimePODWrapper method) run_msg() (src.environment_manager.SubprocessRuntimePODWrapper method) run_shell_command() (in module src.util.processes) runtime_exception_handler() (src.environment_manager.SubprocessRuntimePODWrapper method) runtime_requirements (src.diagnostic.Diagnostic attribute) runtime_terminate() (src.environment_manager.SubprocessRuntimeManager method)

S

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(src.xr_parser.MDTFCFDatasetAccessorMixin method) scalar_name() (src.core.FieldlistEntry method) SECOND (src.util.datelabel.DatePrecision attribute) select_data() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) sentinel_object_factory() (in module src.util.basic) set_case_pod_list() (src.core.MDTFFramework method) set_cli_defaults() (in module src.install) set_entry_point() (src.diagnostic.Diagnostic method) set_experiment() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) set_expt_key() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) set_interpreter() (src.diagnostic.Diagnostic method) set_pod_env_vars() (src.diagnostic.Diagnostic method) setdefault() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) setup() (src.cli.MDTFTopLevelArgParser method) (src.cli.MDTFTopLevelSubcommandArgParser method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.MetadataRewriteParser method) (src.data_sources.MetadataRewritePreprocessor method) (src.data_sources.SampleLocalFileDataSource method) (src.diagnostic.Diagnostic method) (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.AbstractRuntimeManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.SubprocessRuntimeManager method) (src.environment_manager.VirtualenvEnvironmentManager method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) setUp() (src.tests.test_cli.TestCLIConfigManager method) (src.tests.test_cmip6.TestCMIP6_CVs method) (src.tests.test_core.TestPathManager method) (src.tests.test_core.TestPathManagerPodCase method) (src.tests.test_core.TestVariableTranslator method) (src.tests.test_data_manager.TestDataManagerFetchData method) (src.tests.test_data_manager.TestDataManagerSetup method) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod method) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist method) (src.tests.test_diagnostic.TestDiagnosticInit method) (src.tests.test_diagnostic.TestDiagnosticSetUp method) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings method) (src.tests.test_diagnostic.TestDiagnosticTearDown method) (src.tests.test_mdtf.TestMDTFArgParsing method) setup() (src.xr_parser.DefaultDatasetParser method) setUp_config_singletons() (in module src.tests.shared_test_utils) setup_env_vars() (src.environment_manager.SubprocessRuntimePODWrapper method) setup_exception_handler() (src.environment_manager.SubprocessRuntimePODWrapper method) setup_fetch() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractFetchMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFetchMixin method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) setup_pod() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) setup_pod_directories() (src.diagnostic.Diagnostic method) setup_query() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.OnTheFlyDirectoryHierarchyQueryMixin method) (src.data_manager.OnTheFlyFilesystemQueryMixin method) (src.data_manager.OnTheFlyGlobQueryMixin method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) setup_var() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) shell_command_wrapper() (in module src.install) short_name (src.cli.CLIArgument attribute) signal_logger() (in module src.util.logs) SingleFilePreprocessor (class in src.preprocessor) SingleLocalFileDataSource (class in src.data_manager) Singleton (class in src.util.basic) SITE (src.cli.DefaultsFileTypes attribute) site_default_text() (src.cli.CLIConfigManager method) site_dir() (src.cli.CLIConfigManager property) sites_dir() (src.cli.CLIConfigManager property) sorted_pods() (src.mdtf_info.PodDataTuple property) sorted_realms() (src.mdtf_info.PodDataTuple property) source_id (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) span() (src.util.datelabel.AtomicInterval class method) (src.util.datelabel.Date class method) (src.util.datelabel.DateRange class method) spatial_avg (src.cmip6.CMIP6_GridLabel attribute) (src.cmip6.CMIP6_MIPTable attribute)

spawn_subprocess() (src.environment_manager.SubprocessRuntimeManager method) splice_into_list() (in module src.util.basic) split_args() (src.cli.MDTFArgParser static method) (src.cli.MDTFArgPreparser static method) (src.cli.MDTFTopLevelArgParser static method) (src.cli.MDTFTopLevelSubcommandArgParser static method) (src.install.InstallCLIHandler static method) src module src.cli module src.cmip6 module src.conflict_resolution module src.core module src.data_manager module src.data_model module src.data_sources module src.diagnostic module src.environment_manager module src.install module src.mdtf_info module src.output_manager module src.preprocessor module src.tests module src.tests.shared_test_utils module src.tests.test_cli module src.tests.test_cmip6 module src.tests.test_core module src.tests.test_data_manager module src.tests.test_diagnostic module src.tests.test_environment_manager module src.tests.test_mdtf module src.tests.test_units module src.units module src.util module src.util.basic module src.util.dataclass module src.util.datelabel module src.util.exceptions module src.util.filesystem module src.util.logs module src.util.processes module src.util.tests module src.util.tests.test_basic module src.util.tests.test_dataclass module src.util.tests.test_datelabel module src.util.tests.test_filesystem module src.util.tests.test_processes module src.verify_links module src.xr_parser module stage (src.diagnostic.VarlistEntry attribute) standard_name (src.core.FieldlistEntry attribute) (src.core.TranslatedVarlistEntry attribute) (src.data_model.DMAuxiliaryCoordinate attribute) (src.data_model.DMBoundsDimension attribute) (src.data_model.DMCoordinate attribute) (src.data_model.DMCoordinateBounds attribute) (src.data_model.DMDependentVariable attribute) (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMLatitudeCoordinate attribute) (src.data_model.DMLongitudeCoordinate attribute) (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMPlaceholderXCoordinate attribute) (src.data_model.DMPlaceholderYCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_model.DMVariable attribute) (src.data_model.DMVerticalCoordinate attribute) (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) (src.xr_parser.PlaceholderScalarCoordinate attribute) standard_name() (src.data_model.AbstractDMCoordinate property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) start() (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) start_date (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) start_datetime() (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) STATIC (src.util.datelabel.DatePrecision attribute) status (src.core.MDTFFramework attribute) (src.core.MDTFObjectBase attribute) (src.data_manager.DataFrameDataKey attribute) (src.data_manager.DataframeQueryDataSourceBase attribute) (src.data_manager.DataKeyBase attribute) (src.data_manager.DataSourceBase attribute) (src.data_manager.LocalFileDataSource attribute) (src.data_manager.SingleLocalFileDataSource attribute) (src.data_sources.CMIP6LocalFileDataSource attribute) (src.data_sources.ExplicitFileDataSource attribute) (src.data_sources.SampleLocalFileDataSource attribute) (src.diagnostic.Diagnostic attribute) (src.diagnostic.VarlistEntry attribute) stdout() (src.util.exceptions.MDTFCalledProcessError property) store_exception() (src.util.logs.MDTFObjectLogger method) strerror (src.util.exceptions.MDTFFileExistsError attribute) (src.util.exceptions.MDTFFileNotFoundError attribute) StringIOHandler (class in src.util.logs) strip_comments() (in module src.util.filesystem) sub() (src.util.tests.test_filesystem.TestDoubleBraceTemplate method) subcommands_filename (src.cli.CLIConfigManager attribute) SubprocessRuntimeManager (class in src.environment_manager) SubprocessRuntimePODWrapper (class in src.environment_manager) SUCCEEDED (src.core.ObjectStatus attribute)

T

T() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property) table_freq (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_MIPTable attribute) table_id (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_MIPTable attribute) table_id_from_freq() (src.cmip6.CMIP6_CVs method) table_prefix (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_MIPTable attribute) table_qualifier (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_MIPTable attribute) table_suffix (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_MIPTable attribute) TagMatchFilter (class in src.util.logs) target() (src.verify_links.Link property) tear_down() (src.environment_manager.AbstractEnvironmentManager method) (src.environment_manager.AbstractRuntimeManager method) (src.environment_manager.CondaEnvironmentManager method) (src.environment_manager.NullEnvironmentManager method) (src.environment_manager.SubprocessRuntimeManager method) (src.environment_manager.SubprocessRuntimePODWrapper method) (src.environment_manager.VirtualenvEnvironmentManager method) tear_down_fetch() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractFetchMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFetchMixin method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) tear_down_query() (src.data_manager.AbstractDataSource method) (src.data_manager.AbstractQueryMixin method) (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method) tearDown() (src.tests.test_cli.TestCLIConfigManager method) (src.tests.test_cli.TestMDTFArgParserBasic method) (src.tests.test_cli.TestMDTFArgParserHelpFormat method) (src.tests.test_cli.TestMDTFArgParserRecordDefaults method) (src.tests.test_cli.TestParseDummyInput method) (src.tests.test_cli.TestWordWrap method) (src.tests.test_cmip6.TestCMIP6_CVs method) (src.tests.test_core.TestPathManager method) (src.tests.test_core.TestPathManagerPodCase method) (src.tests.test_core.TestVariableTranslator method) (src.tests.test_core.TestVariableTranslatorFiles method) (src.tests.test_data_manager.TestDataManagerFetchData method) (src.tests.test_data_manager.TestDataManagerSetup method) (src.tests.test_data_manager.TestDataManagerSetupNonCFPod method) (src.tests.test_diagnostic.TestDiagnosticCheckVarlist method) (src.tests.test_diagnostic.TestDiagnosticInit method) (src.tests.test_diagnostic.TestDiagnosticSetUp method) (src.tests.test_diagnostic.TestDiagnosticSetUpCustomSettings method) (src.tests.test_diagnostic.TestDiagnosticTearDown method) (src.tests.test_mdtf.TestMDTFArgParsing method) tearDown_config_singletons() (in module src.tests.shared_test_utils) tempdir_cleanup_handler() (src.core.TempDirManager method)

TempDirManager (class in src.core) temporal_avg (src.cmip6.CMIP6_MIPTable attribute) terminator (src.util.logs.HeaderFileHandler attribute) (src.util.logs.MDTFConsoleHandler attribute) (src.util.logs.MDTFHeaderFileHandler attribute) (src.util.logs.StringIOHandler attribute) TestBumpVersion (class in src.util.tests.test_filesystem) TestCanonicalArgName (class in src.tests.test_cli) TestCheckDirs (class in src.util.tests.test_filesystem) TestCLIConfigManager (class in src.tests.test_cli) TestCMIP6_CVs (class in src.tests.test_cmip6) TestCMIP6DateFrequency (class in src.tests.test_cmip6) TestDataManagerFetchData (class in src.tests.test_data_manager) TestDataManagerSetup (class in src.tests.test_data_manager) TestDataManagerSetupNonCFPod (class in src.tests.test_data_manager) TestDate (class in src.util.tests.test_datelabel) TestDateFrequency (class in src.util.tests.test_datelabel) TestDateRange (class in src.util.tests.test_datelabel) TestDiagnosticCheckVarlist (class in src.tests.test_diagnostic) TestDiagnosticInit (class in src.tests.test_diagnostic) TestDiagnosticSetUp (class in src.tests.test_diagnostic) TestDiagnosticSetUpCustomSettings (class in src.tests.test_diagnostic) TestDiagnosticTearDown (class in src.tests.test_diagnostic) TestDoubleBraceTemplate (class in src.util.tests.test_filesystem) TestDRSFilename (class in src.tests.test_cmip6) TestDRSPath (class in src.tests.test_cmip6) TestEnvironmentManager (class in src.tests.test_environment_manager) TestFXDates (class in src.util.tests.test_datelabel) TestJSONC (class in src.util.tests.test_filesystem) TestMDTFABCMeta (class in src.util.tests.test_basic) TestMDTFArgParserBasic (class in src.tests.test_cli) TestMDTFArgParserHelpFormat (class in src.tests.test_cli) TestMDTFArgParserRecordDefaults (class in src.tests.test_cli) TestMDTFArgParsing (class in src.tests.test_mdtf) TestMDTFDataclass (class in src.util.tests.test_dataclass) TestMDTFEnum (class in src.util.tests.test_basic) TestMIPTableParsing (class in src.tests.test_cmip6) TestMultiMap (class in src.util.tests.test_basic) TestNameSpace (class in src.util.tests.test_basic) TestParseDummyInput (class in src.tests.test_cli) TestPathManager (class in src.tests.test_core) TestPathManagerPodCase (class in src.tests.test_core) TestRefTime (class in src.tests.test_units) TestRegexDataclassInheritance (class in src.util.tests.test_dataclass) TestRegexPattern (class in src.util.tests.test_dataclass) TestSerializeClass (class in src.util.tests.test_basic) TestSingleton (class in src.util.tests.test_basic) TestSpliceIntoList (class in src.util.tests.test_basic) TestSubprocessInteraction (class in src.util.tests.test_processes) TestUnitConversionFactor (class in src.tests.test_units) TestVariableTranslator (class in src.tests.test_core) TestVariableTranslatorFiles (class in src.tests.test_core) TestWordWrap (class in src.tests.test_cli) TestWormDict (class in src.util.tests.test_basic) time_settings() (src.diagnostic.VarlistSettings property) TimeoutAlarm title (src.cli.CLIArgumentGroup attribute) to_CF() (src.core.Fieldlist method) (src.core.NoTranslationFieldlist method) (src.core.VariableTranslator method) to_CF_name() (src.core.Fieldlist method) (src.core.NoTranslationFieldlist method) (src.core.VariableTranslator method) to_cfunits() (in module src.units) to_dict() (src.util.basic.MultiMap method) to_equivalent_units() (in module src.units) to_file_glob_tuple() (src.data_sources.ExplicitFileDataSourceConfigEntry method) to_iter() (in module src.util.basic) toDict() (src.core.ConfigManager method) (src.core.PathManager method) (src.util.basic.NameSpace method) transfer() (src.util.logs.MultiFlushMemoryHandler method) transfer_log_cache() (in module src.util.logs) transfer_to_non_console() (src.util.logs.MultiFlushMemoryHandler method) translate() (src.core.Fieldlist method) (src.core.NoTranslationFieldlist method) (src.core.VariableTranslator method) translate_coord() (src.core.Fieldlist method) (src.core.NoTranslationFieldlist method) (src.core.VariableTranslator method) TranslatedVarlistEntry (class in src.core) translation (src.diagnostic.VarlistEntry attribute) type (src.cli.CLIArgument attribute)

U

union() (src.util.datelabel.AtomicInterval method) (src.util.datelabel.Date method) (src.util.datelabel.DateRange method) units (src.core.FieldlistEntry attribute) (src.core.TranslatedVarlistEntry attribute) (src.data_model.DMAuxiliaryCoordinate attribute) (src.data_model.DMCoordinate attribute) (src.data_model.DMCoordinateBounds attribute) (src.data_model.DMDependentVariable attribute) (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMLatitudeCoordinate attribute) (src.data_model.DMLongitudeCoordinate attribute) (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMPlaceholderXCoordinate attribute) (src.data_model.DMPlaceholderYCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_model.DMVariable attribute) (src.data_model.DMVerticalCoordinate attribute) (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistEntry attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) (src.xr_parser.PlaceholderScalarCoordinate attribute)

units() (src.data_model.AbstractDMCoordinate property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) units_equal() (in module src.units) units_equivalent() (in module src.units) units_reftime_base_eq() (in module src.units) UnitsError UnitsUndefinedError untar_data() (in module src.install) update() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) update_defaults() (src.util.dataclass.ChainedRegexPattern method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) upper() (src.util.datelabel.AtomicInterval property) (src.util.datelabel.Date property) (src.util.datelabel.DateRange property) usage (src.cli.CLIParser attribute) use_exact_name (src.diagnostic.VarlistEntry attribute) USER (src.cli.DefaultsFileTypes attribute)

V

validate_commands() (src.environment_manager.SubprocessRuntimePODWrapper method) value (src.data_manager.DataFrameDataKey attribute) (src.data_manager.DataKeyBase attribute) (src.data_model.DMBoundsDimension attribute) (src.data_model.DMCoordinate attribute) (src.data_model.DMGenericTimeCoordinate attribute) (src.data_model.DMLatitudeCoordinate attribute) (src.data_model.DMLongitudeCoordinate attribute) (src.data_model.DMParametricVerticalCoordinate attribute) (src.data_model.DMPlaceholderCoordinate attribute) (src.data_model.DMPlaceholderTCoordinate attribute) (src.data_model.DMPlaceholderXCoordinate attribute) (src.data_model.DMPlaceholderYCoordinate attribute) (src.data_model.DMPlaceholderZCoordinate attribute) (src.data_model.DMTimeCoordinate attribute) (src.data_model.DMVerticalCoordinate attribute) (src.diagnostic.VarlistCoordinate attribute) (src.diagnostic.VarlistLatitudeCoordinate attribute) (src.diagnostic.VarlistLongitudeCoordinate attribute) (src.diagnostic.VarlistPlaceholderTimeCoordinate attribute) (src.diagnostic.VarlistTimeCoordinate attribute) (src.diagnostic.VarlistVerticalCoordinate attribute) value() (src.data_model.AbstractDMCoordinate property) values() (src.util.basic.ConsistentDict method) (src.util.basic.WormDefaultDict method) (src.util.basic.WormDict method) (src.util.dataclass.RegexPattern method) (src.util.dataclass.RegexPatternWithTemplate method) var() (src.data_manager.PodVarTuple property) var_expt_cols (src.data_manager.DataframeQueryColumnSpec attribute) var_name (src.data_sources.ExplicitFileDataSourceConfigEntry attribute) variable (src.data_sources.SampleDataFile attribute) variable_dest_path() (src.data_manager.DataframeQueryDataSourceBase method) (src.data_manager.DataSourceBase method) (src.data_manager.LocalFileDataSource method) (src.data_manager.SingleLocalFileDataSource method) (src.data_sources.CMIP6LocalFileDataSource method) (src.data_sources.ExplicitFileDataSource method) (src.data_sources.SampleLocalFileDataSource method)

variable_id (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) VariableTranslator (class in src.core) variant_label (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_VariantLabel attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) Varlist (class in src.diagnostic) varlist (src.diagnostic.Diagnostic attribute) VarlistCoordinate (class in src.diagnostic) VarlistCoordinateMixin (class in src.diagnostic) VarlistEntry (class in src.diagnostic) VarlistEntryLoggerMixin (class in src.util.logs) VarlistEntryRequirement (class in src.diagnostic) VarlistEntryStage (class in src.diagnostic) VarlistLatitudeCoordinate (class in src.diagnostic) VarlistLongitudeCoordinate (class in src.diagnostic) VarlistPlaceholderTimeCoordinate (class in src.diagnostic) VarlistSettings (class in src.diagnostic) VarlistTimeCoordinate (class in src.diagnostic) VarlistVerticalCoordinate (class in src.diagnostic) vars (src.data_model.DMDataSet attribute) (src.diagnostic.Varlist attribute) verify_all_links() (src.verify_links.LinkVerifier method) verify_paths() (src.core.MDTFFramework method) verify_pod_links() (src.output_manager.HTMLOutputManager method) (src.verify_links.LinkVerifier method) version_date (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.data_sources.CMIP6DataSourceAttributes attribute) VirtualenvEnvironmentManager (class in src.environment_manager)

W

warning() (src.util.logs.MDTFObjectLogger method) with_traceback() (src.util.exceptions.ChildFailureEvent method) (src.util.exceptions.ConventionError method) (src.util.exceptions.DataclassParseError method) (src.util.exceptions.DataExperimentEvent method) (src.util.exceptions.DataFetchEvent method) (src.util.exceptions.DataPreprocessEvent method) (src.util.exceptions.DataProcessingEvent method) (src.util.exceptions.DataQueryEvent method) (src.util.exceptions.DataRequestError method) (src.util.exceptions.FatalErrorEvent method) (src.util.exceptions.FXDateException method) (src.util.exceptions.GenericDataSourceEvent method) (src.util.exceptions.MDTFBaseException method) (src.util.exceptions.MDTFCalledProcessError method) (src.util.exceptions.MDTFEvent method) (src.util.exceptions.MDTFFileExistsError method) (src.util.exceptions.MDTFFileNotFoundError method) (src.util.exceptions.MetadataError method) (src.util.exceptions.MetadataEvent method) (src.util.exceptions.MixedDatePrecisionException method) (src.util.exceptions.PodConfigError method) (src.util.exceptions.PodConfigEvent method) (src.util.exceptions.PodDataError method) (src.util.exceptions.PodExceptionBase method) (src.util.exceptions.PodExecutionError method) (src.util.exceptions.PodRuntimeError method) (src.util.exceptions.PropagatedEvent method) (src.util.exceptions.RegexParseError method) (src.util.exceptions.RegexSuppressedError method) (src.util.exceptions.TimeoutAlarm method) (src.util.exceptions.UnitsError method) (src.util.exceptions.UnitsUndefinedError method) (src.util.exceptions.WormKeyError method)

word_wrap() (in module src.cli) WormDefaultDict (class in src.util.basic) WormDict (class in src.util.basic) WormKeyError write_data_log_file() (src.output_manager.HTMLOutputManager method) (src.output_manager.HTMLPodOutputManager method) (src.output_manager.HTMLSourceFileMixin method) write_dataset() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) write_ds() (src.data_sources.MetadataRewritePreprocessor method) (src.preprocessor.DaskMultiFilePreprocessor method) (src.preprocessor.DefaultPreprocessor method) (src.preprocessor.MDTFPreprocessorBase method) (src.preprocessor.SampleDataPreprocessor method) (src.preprocessor.SingleFilePreprocessor method) write_json() (in module src.util.filesystem)

X

X() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property)

Y

Y() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property)

YEAR (src.util.datelabel.DatePrecision attribute)

Z

Z() (src.core.FieldlistEntry property) (src.core.TranslatedVarlistEntry property) (src.data_model.AbstractDMCoordinateBounds property) (src.data_model.AbstractDMDependentVariable property) (src.data_model.DMAuxiliaryCoordinate property) (src.data_model.DMCoordinateBounds property) (src.data_model.DMDataSet property) (src.data_model.DMDependentVariable property) (src.data_model.DMVariable property) (src.diagnostic.Varlist property) (src.diagnostic.VarlistEntry property)

zonal_mean (src.cmip6.CMIP6_DRSDirectory attribute) (src.cmip6.CMIP6_DRSFilename attribute) (src.cmip6.CMIP6_DRSPath attribute) (src.cmip6.CMIP6_GridLabel attribute)